Backofen, Rolf, 1963-
Backofen, Rolf.
Rolf Backofen
VIAF ID: 77540079 ( Personal )
Permalink: http://viaf.org/viaf/77540079
Preferred Forms
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- 100 1 _ ‡a Backofen, Rolf (sparse)
- 100 1 _ ‡a Backofen, Rolf
- 100 1 _ ‡a Backofen, Rolf
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- 100 1 _ ‡a Backofen, Rolf ‡d 1963-
- 100 1 _ ‡a Backofen, Rolf ‡d 1963-
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- 100 0 _ ‡a Rolf Backofen
4xx's: Alternate Name Forms (5)
5xx's: Related Names (10)
- 510 2 _ ‡a Albert-Ludwigs-Universität Freiburg ‡b Institut für Informatik ‡4 affi ‡4 https://d-nb.info/standards/elementset/gnd#affiliation ‡e Affiliation
- 510 2 _ ‡a Deutsches Forschungszentrum für Künstliche Intelligenz ‡4 affi ‡4 https://d-nb.info/standards/elementset/gnd#affiliation ‡e Affiliation
- 510 2 _ ‡a Deutsches Forschungszentrum für Künstliche Intelligenz
- 551 _ _ ‡a Freiburg im Breisgau ‡4 ortw ‡4 https://d-nb.info/standards/elementset/gnd#placeOfActivity
- 510 2 _ ‡a Friedrich-Schiller-Universität Jena ‡4 affi ‡4 https://d-nb.info/standards/elementset/gnd#affiliation ‡e Affiliation
- 510 2 _ ‡a Institut für Informatik (Freiburg, Breisgau)
- 551 _ _ ‡a Jena ‡4 ortw ‡4 https://d-nb.info/standards/elementset/gnd#placeOfActivity
- 551 _ _ ‡a Saarbrücken ‡4 ortw ‡4 https://d-nb.info/standards/elementset/gnd#placeOfActivity
- 510 2 _ ‡a Universität Jena
- 510 2 _ ‡a Warnemünde, Wustrow, Ingenieurhochsch. für Seefahrt, Wissenschaftl. Rat
Works
Title | Sources |
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Analysis of high-throughput sequencing data related to small non-coding RNAs biogenesis and function | |
An archaeal sRNA targeting cis - and trans-encoded mRNAs via two distinct domains | |
complete axiomatization of a theory with feature and arity constraints | |
Computational molecular biology. | |
CRISPRstrand: predicting repeat orientations to determine the crRNA-encoding strand at CRISPR loci | |
CRISPRtracrRNA: robust approach for CRISPR tracrRNA detection | |
Data analysis for the COVID-19 research: contributions of the German Network of Bioinformatics Infrastructure | |
Development and application of ligand-based cheminformatics tools for drug discovery from natural products = Entwicklung und Anwendung von ligandenbasierten Cheminformatik-Programmen für die Identifizierung von Arzneimitteln aus Naturstoffen | |
Differential transcriptional responses to Ebola and Marburg virus infection in bat and human cells | |
Differentiation of ncRNAs from small mRNAs in Escherichia coli O157:H7 EDL933 (EHEC) by combined RNAseq and RIBOseq – ryhB encodes the regulatory RNA RyhB and a peptide, RyhP | |
DISCO - an HPSG-based NLP system and its application for appointment scheduling | |
Distinct epigenetic programs regulate cardiac myocyte development and disease in the human heart in vivo | |
Distinct SARS-CoV-2 RNA fragments activate Toll-like receptors 7 and 8 and induce cytokine release from human macrophages and microglia | |
DOT1L promotes progenitor proliferation and primes neuronal layer identity in the developing cerebral cortex | |
Exploring the lower part of discrete polymer model energy landscapes | |
Expressivity and decidability of first-order languages over feature trees | |
Fast and accurate structure probability estimation for simultaneous alignment and folding of RNAs with Markov chains | |
FOXG1 regulates PRKAR2B transcriptionally and posttranscriptionally via miR200 in the adult hippocampus | |
Freiburg RNA tools: a central online resource for RNA-focused research and teaching | |
Freiburg RNA Tools: a web server integrating INTARNA, EXPARNA and LOCARNA | |
Galaxy HiCExplorer: a web server for reproducible Hi-C data analysis, quality control and visualization | |
Galaxy workflows for fragment-based virtual screening: a case study on the SARS-CoV-2 main protease | |
Genome wide CRISPR screen for Pasteurella multocida toxin (PMT) binding proteins reveals LDL Receptor Related Protein 1 (LRP1) as crucial cellular receptor | |
GenToS: use of orthologous gene information to prioritize signals from human GWAS | |
GLASSgo – automated and reliable detection of sRNA homologs from a single input sequence | |
Global or local? Predicting secondary structure and accessibility in mRNAs | |
Global RNA recognition patterns of post‐transcriptional regulators Hfq and CsrA revealed by UV crosslinkingin vivo | |
GraphDDP: a graph-embedding approach to detect differentiation pathways in single-cell-data using prior class knowledge | |
GRIN3B missense mutation as an inherited risk factor for schizophrenia: whole-exome sequencing in a family with a familiar history of psychotic disorders | |
High detection rate for disease-causing variants in a cohort of 30 Iranian pediatric steroid resistant nephrotic syndrome cases | |
hnRNP R and its main interactor, the noncoding RNA 7SK, coregulate the axonal transcriptome of motoneurons | |
How to win a game with features | |
Improved discovery of RNA-binding protein binding sites in eCLIP data using DEWSeq | |
Improving CLIP-seq data analysis by incorporating transcript information | |
In Silico Prediction of Modular Domain-Peptide Interactions | |
Inferring Non-Coding RNA Families and Classes by Means of Genome-Scale Structure-Based Clustering | |
INFO-RNA—a server for fast inverse RNA folding satisfying sequence constraints | |
IntaRNA 2.0: enhanced and customizable prediction of RNA–RNA interactions | |
Integration of accessibility data from structure probing into RNA–RNA interaction prediction | |
Integration of public high-throughput databases in quantitative biology | |
Interactive implementations of thermodynamics-based RNA structure and RNA–RNA interaction prediction approaches for example-driven teaching | |
Interrogating two extensively self-targeting Type I CRISPR-Cas systems in Xanthomonas albilineans reveals distinct anti-CRISPR proteins that block DNA degradation | |
Jupyter and Galaxy: Easing entry barriers into complex data analyses for biomedical researchers | |
Linking typed feature formalisms and terminological knowledge representation languages in natural language front ends | |
lncRNA landscape of breast cancer reveals a role for DSCAM-AS1 in breast cancer progression | |
Loop detection using Hi-C data with HiCExplorer | |
Mechanism of [beta]-actin mRNA Recognition by ZBP1 | |
MechRNA: prediction of lncRNA mechanisms from RNA–RNA and RNA–protein interactions | |
Meta-analysis of mechano-sensitive ion channels in human hearts: chamber- and disease-preferential mRNA expression | |
MICA: multiple interval-based curve alignment | |
MicroRNA-100-5p and microRNA-298-5p released from apoptotic cortical neurons are endogenous Toll-like receptor 7/8 ligands that contribute to neurodegeneration | |
Modelling binding preferences of RNA-binding proteins | |
MutaRNA: analysis and visualization of mutation-induced changes in RNA structure | |
Nephronophthisis gene products display RNA-binding properties and are recruited to stress granules | |
nuts and bolts of the Haloferax CRISPR-Cas system I-B | |
Optimizing algorithms for the comparative analysis of non-coding RNAs | |
Peakhood: individual site context extraction for CLIP-seq peak regions | |
PETfold and PETcofold web servers for intra- and intermolecular structures of multiple RNA sequences | |
Predicting small RNA targets in prokaryotes – a challenge beyond the barriers of thermodynamic models | |
Publisher correction: Chemotherapy-induced transposable elements activate MDA5 to enhance haematopoietic regeneration | |
Recent advances in RNA folding | |
Rechnerische Methoden für Gitterproteinmodelle | |
Recognition of functional relationships between biomedical concepts in the scientific literature using text mining and machine learning | |
Regular path expressions in feature logic | |
Report of the EAGLES Workshop on Implemented Formalisms at DFKI, Saarbrücken | |
RiboReport - benchmarking tools for ribosome profiling-based identification of open reading frames in bacteria | |
Ribosome profiling reveals the fine-tuned response of Escherichia coli to mild and severe acid stress | |
RIP-Seq suggests translational regulation by L7Ae in Archaea | |
RNA-binding protein ARPP21 controls dendritic branching by functionally opposing the miRNA it hosts | |
RNA-bioinformatics: Tools, services and databases for the analysis of RNA-based regulation | |
RNA interaction format: a general data format for RNA interactions | |
RNA workbench: best practices for RNA and high-throughput sequencing bioinformatics in Galaxy | |
RNAProt: an efficient and feature-rich RNA binding protein binding site predictor | |
RNAs Everywhere genome‐wide annotation of structured RNAs | |
RNAscClust: clustering RNA sequences using structure conservation and graph based motifs | |
role of the 5’ sensing function of ribonuclease E in cyanobacteria | |
Sampling and Approximation in the Context of RNA Secondary Structure Prediction - Algorithms and Studies Based on Stochastic Context-Free Modeling | |
Semi-supervised prediction of SH2-peptide interactions from imbalanced high-throughput data | |
ShaKer: RNA SHAPE prediction using graph kernel | |
A single-cell RNA-sequencing training and analysis suite using the Galaxy framework | |
Spectrum of genetic variants in a cohort of 37 laterality defect cases | |
Standardization of CLIP-seq data analysis and optimization of related peak calling to investigate RNA-protein interactions | |
StoatyDive: evaluation and classification of peak profiles for sequencing data | |
Structural constraints and enzymatic promiscuity in the Cas6-dependent generation of crRNAs | |
Temporospatial distribution and transcriptional profile of retinal microglia in the oxygen‐induced retinopathy mouse model | |
Tōkei butsuri kagaku kara manabu baioinfomatikusu | |
Towards the integration of functions, relations and types in an AI programming language | |
Transformer-based tool recommendation system in Galaxy | |
Unifying evolutionary and thermodynamic information for RNA folding of multiple alignments | |
Using local RNA secondary structures for computational comparison and clustering of RNA molecules | |
uvCLAP is a fast and non-radioactive method to identify in vivo targets of RNA-binding proteins | |
Variations on RNA folding and alignment lessons from Benasque | |
統計物理化学から学ぶバイオインフォマティクス |