Martin Vingron österreichischer Bioinformatiker
Vingron, Martin 1961-
Vingron, Martin
VIAF ID: 54838905 (Personal)
Permalink: http://viaf.org/viaf/54838905
Preferred Forms
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Martin Vingron
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österreichischer Bioinformatiker
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Vingron, Martin
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Vingron, Martin
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100 1 _ ‡a Vingron, Martin
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100 1 _ ‡a Vingron, Martin
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100 1 _ ‡a Vingron, Martin ‡d (1961- ).
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100 1 _
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Vingron, Martin
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1961-
4xx's: Alternate Name Forms (14)
5xx's: Related Names (5)
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Berlin
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https://d-nb.info/standards/elementset/gnd#placeOfActivity
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Deutsche Akademie der Naturforscher Leopoldina
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https://d-nb.info/standards/elementset/gnd#affiliation
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Affiliation
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Freie Universität Berlin
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Fachbereich Mathematik und Informatik
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affi
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https://d-nb.info/standards/elementset/gnd#affiliation
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Affiliation
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Max-Planck-Institut für Molekulare Genetik
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https://d-nb.info/standards/elementset/gnd#affiliation
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Affiliation
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Wien
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https://d-nb.info/standards/elementset/gnd#placeOfBirth
Works
| Title | Sources |
|---|---|
| Better tree alignments through near-optimal intermediates |
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| Gene und Menschen 50 Jahre Forschung am Max-Planck-Institut für Molekulare Genetik |
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| Genomic dissection of enhancers uncovers principles of combinatorial regulation and cell type-specific wiring of enhancer-promoter contacts. |
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| Haplotype-resolved sweet potato genome traces back its hexaploidization history |
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| Horizontal gene transfer in aminoacyl-tRNA synthetases including leucine-specific subtypes. |
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| Horizontal Gene Transfers in prokaryotes show differential preferences for metabolic and translational genes |
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| Identification of highly specific localized sequence motifs in human ribosomal protein gene promoters |
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| Identification of novel fusion genes in lung cancer using breakpoint assembly of transcriptome sequencing data |
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| Improved detection of overrepresentation of Gene-Ontology annotations with parent child analysis |
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| Improved Prediction of Non-methylated Islands in Vertebrates Highlights Different Characteristic Sequence Patterns |
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| In silico identification of a core regulatory network of OCT4 in human embryonic stem cells using an integrated approach |
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| Incorporating evolution of transcription factor binding sites into annotated alignments. |
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| Increase of functional diversity by alternative splicing |
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| Induction of kidney-related gene programs through co-option of <i>SALL1</i> in mole ovotestes |
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| Inference of interactions between chromatin modifiers and histone modifications: from ChIP-Seq data to chromatin-signaling |
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| Inferring nucleosome positions with their histone mark annotation from ChIP data |
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| Inferring the paths of somatic evolution in cancer |
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| IntAct: an open source molecular interaction database |
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| Integrating sequence, evolution and functional genomics in regulatory genomics |
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| Integrative genomic profiling of large-cell neuroendocrine carcinomas reveals distinct subtypes of high-grade neuroendocrine lung tumors. |
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| The KRAB-containing zinc-finger transcriptional regulator ZBRK1 activates SCA2 gene transcription through direct interaction with its gene product, ataxin-2. |
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| Large scale hierarchical clustering of protein sequences |
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| Mammalian mitochondrial nitric oxide synthase: characterization of a novel candidate |
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| Managing and mining genome information: frontiers in bioinformatics 05441 abstracts collection ; Dagstuhl seminar |
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| Mapping translocation breakpoints by next-generation sequencing |
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| Maximum similarity: a new formulation of phylogenetic reconstruction. |
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| Microarray data representation, annotation and storage |
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| Microarray data warehouse allowing for inclusion of experiment annotations in statistical analysis |
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| Minimum information about a microarray experiment (MIAME)-toward standards for microarray data |
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| Modeling read counts for CNV detection in exome sequencing data |
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| The mole genome reveals regulatory rearrangements associated with adaptive intersexuality |
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| Monitoring the switch from housekeeping to pathogen defense metabolism in Arabidopsis thaliana using cDNA arrays |
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| Multiple sequence alignment and applications in molecular biology |
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| Natural similarity measures between position frequency matrices with an application to clustering |
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| Natural variation of histone modification and its impact on gene expression in the rat genome |
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| New evidence for genome-wide duplications at the origin of vertebrates using an amphioxus gene set and completed animal genomes |
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| NOA1 is an essential GTPase required for mitochondrial protein synthesis |
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| Normalization and quantification of differential expression in gene expression microarrays |
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| On the equivalence of two tree mapping measures |
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| Ontologizer 2.0--a multifunctional tool for GO term enrichment analysis and data exploration |
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| Optimal robust non-unique probe selection using Integer Linear Programming |
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| P53 binding sites in transposons |
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| Paracrine control of oligodendrocyte differentiation by SRF-directed neuronal gene expression |
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| Parameter estimation for the calibration and variance stabilization of microarray data |
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| PASTAA: identifying transcription factors associated with sets of co-regulated genes |
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| Polymer physics predicts the effects of structural variants on chromatin architecture. |
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| Predicting enhancers in mammalian genomes using supervised hidden Markov models |
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| Predicting the outcome of renal transplantation |
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| Predicting transcription factor affinities to DNA from a biophysical model |
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| Prediction of alternative isoforms from exon expression levels in RNA-Seq experiments |
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| Prediction of cardiac transcription networks based on molecular data and complex clinical phenotypes |
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| Prioritization of gene regulatory interactions from large-scale modules in yeast |
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| Quantifying the effect of sequence variation on regulatory interactions |
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| R2KS: a novel measure for comparing gene expression based on ranked gene lists |
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| Ranbow: A fast and accurate method for polyploid haplotype reconstruction |
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| Reconstruction of gene networks using prior knowledge |
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| Reconstruction of gene regulatory network related to photosynthesis in Arabidopsis thaliana |
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| Research in computational molecular biology, c2008: |
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| Role of the chromatin landscape and sequence in determining cell type-specific genomic glucocorticoid receptor binding and gene regulation |
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| Self-correcting networks: function, robustness, and motif distributions in biological signal processing. |
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| Sequence-dependent nucleosome positioning |
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| Sequences flanking the core-binding site modulate glucocorticoid receptor structure and activity |
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| Serial genomic inversions induce tissue-specific architectural stripes, gene misexpression and congenital malformations |
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| Simultaneous alignment and annotation of cis-regulatory regions |
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| SITEBLAST--rapid and sensitive local alignment of genomic sequences employing motif anchors |
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| Soluble epoxide hydrolase is a susceptibility factor for heart failure in a rat model of human disease. |
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| Somatic neurofibromatosis type 1 (NF1) inactivation events in cutaneous neurofibromas of a single NF1 patient |
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| Special RECOMB 2008 Issue. Preface. |
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| The SRF target gene Fhl2 antagonizes RhoA/MAL-dependent activation of SRF |
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| ssHMM: extracting intuitive sequence-structure motifs from high-throughput RNA-binding protein data |
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| Statistical detection of cooperative transcription factors with similarity adjustment |
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| Strengths and weaknesses of EST-based prediction of tissue-specific alternative splicing |
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| Studying the evolution of promoter sequences: a waiting time problem |
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| Support Vector Machines for Protein Fold Class Prediction |
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| Synthetic sickness or lethality points at candidate combination therapy targets in glioblastoma |
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| SYSTERS, GeneNest, SpliceNest: exploring sequence space from genome to protein |
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| SYSTERS Protein Family Database in 2005 |
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| T cells become licensed in the lung to enter the central nervous system |
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| T-Reg Comparator: an analysis tool for the comparison of position weight matrices |
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| T-STAG: resource and web-interface for tissue-specific transcripts and genes |
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| Theoretical analysis of alternative splice forms using computational methods. |
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| Time-Dependent Gene Network Modelling by Sequential Monte Carlo |
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| Towards integration of multiple alignment and phylogenetic tree construction |
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| Transcription factor binding predictions using TRAP for the analysis of ChIP-seq data and regulatory SNPs |
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| Transcriptional autoregulatory loops are highly conserved in vertebrate evolution |
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| TREE-PUZZLE: maximum likelihood phylogenetic analysis using quartets and parallel computing |
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| Weighted sequence graphs: boosting iterated dynamic programming using locally suboptimal solutions |
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