Simon J. Hubbard
Hubbard, Simon J.
VIAF ID: 166320107 (Personal)
Permalink: http://viaf.org/viaf/166320107
Preferred Forms
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- 100 1 _ ‡a Hubbard, Simon J.
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- 100 1 _ ‡a Hubbard, Simon J.
- 100 1 _ ‡a Hubbard, Simon J.
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- 100 0 _ ‡a Simon J. Hubbard
4xx's: Alternate Name Forms (2)
Works
Title | Sources |
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The 4E-BP Caf20p Mediates Both eIF4E-Dependent and Independent Repression of Translation | |
Absolute protein quantification of the yeast chaperome under conditions of heat shock | |
Addressing statistical biases in nucleotide-derived protein databases for proteogenomic search strategies | |
Analysis of Intrinsic Peptide Detectability via Integrated Label-Free and SRM-Based Absolute Quantitative Proteomics. | |
Analysis of the trypanosome flagellar proteome using a combined electron transfer/collisionally activated dissociation strategy | |
Archetypal transcriptional blocks underpin yeast gene regulation in response to changes in growth conditions. | |
BioMart Central Portal: an open database network for the biological community | |
Characterising alternate splicing and tissue specific expression in the chicken from ESTs | |
The chicken as a model for large-scale analysis of vertebrate gene function. | |
Comparative genome analysis across a kingdom of eukaryotic organisms: specialization and diversification in the fungi | |
A comprehensive collection of chicken cDNAs. | |
Computational approaches to peptide identification via tandem MS. | |
Computational phosphoproteomics: from identification to localization | |
Conceptual modelling of genomic information | |
Conservation of Orientation and Sequence in Protein Domain–Domain Interactions | |
A critical appraisal of techniques, software packages, and standards for quantitative proteomic analysis | |
A critical assessment of the secondary structure alpha-helices and their termini in proteins. | |
Cross species proteomics. | |
Detection of internal cavities in globular proteins. | |
Differential Expression of Ion Channel Transcripts in Atrial Muscle and Sinoatrial Node in Rabbit | |
Direct and Absolute Quantification of over 1800 Yeast Proteins via Selected Reaction Monitoring. | |
Disease modeling of core pre-mRNA splicing factor haploinsufficiency | |
Distributions of ion series in ETD and CID spectra: making a comparison. | |
Dynamic Acclimation to High Light in Arabidopsis thaliana Involves Widespread Reengineering of the Leaf Proteome | |
Dynamic changes in eIF4F-mRNA interactions revealed by global analyses of environmental stress responses | |
e-Fungi: a data resource for comparative analysis of fungal genomes | |
Effect of polymorphisms on ligand binding by mouse major urinary proteins | |
Evidence on close packing and cavities in proteins. | |
Exploiting proteomic data for genome annotation and gene model validation in Aspergillus niger | |
Expression screening and annotation of a zebrafish myoblast cDNA library | |
FDRAnalysis: a tool for the integrated analysis of tandem mass spectrometry identification results from multiple search engines | |
The Functional Genomics Experiment model (FuGE): an extensible framework for standards in functional genomics | |
A Functional Role for Protein Cavities in Domain:Domain Motions | |
A genetic variation map for chicken with 2.8 million single-nucleotide polymorphisms | |
Getting a grip on proteomics data - Proteomics Data Collection (ProDaC). | |
Global absolute quantification of a proteome: Challenges in the deployment of a QconCAT strategy. | |
Global gene expression profiling reveals widespread yet distinctive translational responses to different eukaryotic translation initiation factor 2B-targeting stress pathways | |
Global mRNA selection mechanisms for translation initiation. | |
Glycolytic flux in is dependent on RNA polymerase III and its negative regulator Maf1 | |
Human and mouse homo-oligomeric meprin A metalloendopeptidase: substrate and inhibitor specificities | |
Identifying eIF4E-binding protein translationally-controlled transcripts reveals links to mRNAs bound by specific PUF proteins | |
Improving sensitivity in proteome studies by analysis of false discovery rates for multiple search engines | |
An informatic pipeline for the data capture and submission of quantitative proteomic data using iTRAQ | |
Integrated multi-omics analyses reveal the pleiotropic nature of the control of gene expression by Puf3p | |
Investigating protein isoforms via proteomics: a feasibility study | |
ISPIDER Central: an integrated database web-server for proteomics | |
A kingdom-specific protein domain HMM library for improved annotation of fungal genomes | |
The mzIdentML data standard for mass spectrometry-based proteomics results | |
The mzqLibrary--An open source Java library supporting the HUPO-PSI quantitative proteomics standard. | |
Observations on the detection of b- and y-type ions in the collisionally activated decomposition spectra of protonated peptides | |
PEDRo: a database for storing, searching and disseminating experimental proteomics data | |
PepSeeker: a database of proteome peptide identifications for investigating fragmentation patterns | |
PepSeeker: mining information from proteomic data | |
Peptide detectability following ESI mass spectrometry | |
Predicted transcription factor binding sites as predictors of operons in Escherichia coli and Streptomyces coelicolor | |
Prediction of missed proteolytic cleavages for the selection of surrogate peptides for quantitative proteomics | |
Proteome bioinformatics | |
A proteome-integrated, carbon source dependent genetic regulatory network in Saccharomyces cerevisiae | |
Puf3p induces translational repression of genes linked to oxidative stress | |
Quantitative proteomics and network analysis of SSA1 and SSB1 deletion mutants reveals robustness of chaperone HSP70 network in Saccharomyces cerevisiae | |
Representation of selected-reaction monitoring data in the mzQuantML data standard | |
Ribosomal flavours: an acquired taste for specific mRNAs? | |
Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution | |
Sequence search algorithms for single pass sequence identification: does one size fit all? | |
SiteSeer: Visualisation and analysis of transcription factor binding sites in nucleotide sequences | |
Stable isotope labelling in vivo as an aid to protein identification in peptide mass fingerprinting | |
The structural aspects of limited proteolysis of native proteins | |
Transcriptome analysis for the chicken based on 19,626 finished cDNA sequences and 485,337 expressed sequence tags | |
UKPMC: a full text article resource for the life sciences | |
Upstream sequence elements direct post-transcriptional regulation of gene expression under stress conditions in yeast. | |
Use of fortuitous in vitro mutations in a synthetic Cu-Zn superoxide dismutase gene to illuminate protein structure-function relationships. | |
Whole-cell modeling in yeast predicts compartment-specific proteome constraints that drive metabolic strategies | |
The yeast La related protein Slf1p is a key activator of translation during the oxidative stress response. |