Ilpo Vattulainen researcher
Vattulainen, Ilpo.
Vattulainen, I. (Ilpo)
VIAF ID: 14154415 (Personal)
Permalink: http://viaf.org/viaf/14154415
Preferred Forms
- 100 0 _ ‡a Ilpo Vattulainen ‡c researcher
- 100 1 _ ‡a Vattulainen, I. ‡q (Ilpo)
- 100 1 _ ‡a Vattulainen, Ilpo
-
- 100 1 _ ‡a Vattulainen, Ilpo
-
4xx's: Alternate Name Forms (3)
Works
Title | Sources |
---|---|
Cholesterol oxidation products and their biological importance | |
Cholesterol Protects the Oxidized Lipid Bilayer from Water Injury: An All-Atom Molecular Dynamics Study. | |
Cholesterol under oxidative stress—How lipid membranes sense oxidation as cholesterol is being replaced by oxysterols | |
Co-exposure with fullerene may strengthen health effects of organic industrial chemicals | |
Coarse-grained model for phospholipid/cholesterol bilayer employing inverse Monte Carlo with thermodynamic constraints | |
Comparison of cholesterol and its direct precursors along the biosynthetic pathway: effects of cholesterol, desmosterol and 7-dehydrocholesterol on saturated and unsaturated lipid bilayers | |
Composition and lipid spatial distribution of HDL particles in subjects with low and high HDL-cholesterol | |
Concerted regulation of npc2 binding to endosomal/lysosomal membranes by bis(monoacylglycero)phosphate and sphingomyelin | |
Conformational analysis of lipid molecules by self-organizing maps | |
Cryo-EM structure of the complete and ligand-saturated insulin receptor ectodomain | |
Cryo-EM, X-ray diffraction, and atomistic simulations reveal determinants for the formation of a supramolecular myelin-like proteolipid lattice | |
Crystalline Wax Esters Regulate the Evaporation Resistance of Tear Film Lipid Layers Associated with Dry Eye Syndrome | |
Data including GROMACS input files for atomistic molecular dynamics simulations of mixed, asymmetric bilayers including molecular topologies, equilibrated structures, and force field for lipids compatible with OPLS-AA parameters | |
The Devil Is in the Details: What Do We Really Track in Single-Particle Tracking Experiments of Diffusion in Biological Membranes? | |
Diffusion of Integral Membrane Proteins in Protein-Rich Membranes. | |
Distribution and dynamics of quinones in the lipid bilayer mimicking the inner membrane of mitochondria. | |
doGlycans-Tools for Preparing Carbohydrate Structures for Atomistic Simulations of Glycoproteins, Glycolipids, and Carbohydrate Polymers for GROMACS. | |
Dynamics and energetics of the mammalian phosphatidylinositol transfer protein phospholipid exchange cycle. | |
Dynamics of the Peripheral Membrane Protein P2 from Human Myelin Measured by Neutron Scattering--A Comparison between Wild-Type Protein and a Hinge Mutant | |
The Effect of Membrane Polyunsaturated Fatty Acids on Receptor Partitioning to Ordered Domains | |
Effects of DPH on DPPC-cholesterol membranes with varying concentrations of cholesterol: from local perturbations to limitations in fluorescence anisotropy experiments | |
Effects of Membrane PEGylation on Entry and Location of Antifungal Drug Itraconazole and Their Pharmacological Implications | |
Excessive aggregation of membrane proteins in the Martini model | |
Experimental determination and computational interpretation of biophysical properties of lipid bilayers enriched by cholesteryl hemisuccinate | |
The F1 loop of the talin head domain acts as a gatekeeper in integrin activation and clustering | |
Glucosylceramide modifies the LPS-induced inflammatory response in macrophages and the orientation of the LPS/TLR4 complex in silico | |
Glycolipid membranes through atomistic simulations: effect of glucose and galactose head groups on lipid bilayer properties. | |
Glycosylation Affects the Conformational Behavior of EGFR | |
Glycosylation and Lipids Working in Concert Direct CD2 Ectodomain Orientation and Presentation | |
How Cardiolipin Peroxidation Alters the Properties of the Inner Mitochondrial Membrane? | |
How endoglucanase enzymes act on cellulose nanofibrils: role of amorphous regions revealed by atomistic simulations | |
How To Minimize Artifacts in Atomistic Simulations of Membrane Proteins, Whose Crystal Structure Is Heavily Engineered: β₂-Adrenergic Receptor in the Spotlight. | |
How to minimize dye-induced perturbations while studying biomembrane structure and dynamics: PEG linkers as a rational alternative | |
Influence of cis double-bond parametrization on lipid membrane properties: how seemingly insignificant details in force-field change even qualitative trends | |
Influence of DPH on the structure and dynamics of a DPPC bilayer | |
Influence of Pyrene-Labeling on Fluid Lipid Membranes | |
The Integrin Receptor in Biologically Relevant Bilayers: Insights from Molecular Dynamics Simulations. | |
Interaction of fusidic acid with lipid membranes: Implications to the mechanism of antibiotic activity | |
Interdigitation of long-chain sphingomyelin induces coupling of membrane leaflets in a cholesterol dependent manner | |
Lateral Diffusion in Lipid Membranes through Collective Flows | |
Lipid domain morphologies in phosphatidylcholine-ceramide monolayers | |
Lipid membranes: Theory and simulations bridged to experiments. | |
Lipids, Neurotransmitters and their Receptors | |
Long-chain GM1 gangliosides alter transmembrane domain registration through interdigitation. | |
Mechanism of allosteric regulation of β2-adrenergic receptor by cholesterol | |
Mechanism of homodimeric cytokine receptor activation and dysregulation by oncogenic mutations | |
Mechanism of synergistic actin filament pointed end depolymerization by cyclase-associated protein and cofilin | |
Membrane-Dependent Binding and Entry Mechanism of Dopamine into Its Receptor | |
Microscopic Mechanism for Cold Denaturation | |
Molecular Basis of GLUT4 in Glucose Transport: Atomistic Molecular Dynamics Study | |
Molecular dynamics study of charged dendrimers in salt-free solution: Effect of counterions | |
Molecular mechanism for inhibition of twinfilin by phosphoinositides. | |
Molecular mechanisms of Charcot-Marie-Tooth neuropathy linked to mutations in human myelin protein P2. | |
Molecular organization of the tear fluid lipid layer | |
Molecular Simulations and Biomembranes : From Biophysics to Function | |
Multiscale modeling of emergent materials: biological and soft matter | |
Mutually Exclusive Roles of SHARPIN in Integrin Inactivation and NF-κB Signaling | |
N-Glycosylation as determinant of epidermal growth factor receptor conformation in membranes | |
The Na,K-ATPase acts upstream of phosphoinositide PI(4,5)P2 facilitating unconventional secretion of Fibroblast Growth Factor 2 | |
Nanoscale Membrane Domain Formation Driven by Cholesterol. | |
Negatively Charged Gangliosides Promote Membrane Association of Amphipathic Neurotransmitters | |
Nonequilibrium effects in diffusion of interacting particles on vicinal surfaces | |
Novel methods in soft matter simulations | |
On Atomistic Models for Molecular Oxygen | |
Oxidation of Cholesterol Does Not Alter Significantly Its Uptake into High-Density Lipoprotein Particles | |
PEGylated Liposomes as Carriers of Hydrophobic Porphyrins | |
Phase Partitioning of GM1 and Its Bodipy-Labeled Analog Determine Their Different Binding to Cholera Toxin | |
PI(4,5)P 2 Binds to Phospholipase C Delta 1 in a Cholesterol Concentration Dependent Manner: Perspective on Implications to PI(4,5)P 2 -Binding Proteins | |
PIP2 and Talin Join Forces to Activate Integrin | |
Properties of the Membrane Binding Component of Catechol-O-methyltransferase Revealed by Atomistic Molecular Dynamics Simulations | |
Protein Crowding in Lipid Bilayers Gives Rise to Non-Gaussian Anomalous Lateral Diffusion of Phospholipids and Proteins | |
Quantitative Assessment of Methods Used To Obtain Rate Constants from Molecular Dynamics Simulations—Translocation of Cholesterol across Lipid Bilayers | |
Redox-induced activation of the proton pump in the respiratory complex I. | |
Reduced level of docosahexaenoic acid shifts GPCR neuroreceptors to less ordered membrane regions | |
Reptational dynamics in dissipative particle dynamics simulations of polymer melts | |
Role of charged lipids in membrane structures - Insight given by simulations | |
The role of hydrophobic matching on transmembrane helix packing in cells | |
Role of subunit III and its lipids in the molecular mechanism of cytochrome c oxidase. | |
The Role of Temperature and Lipid Charge on Intake/Uptake of Cationic Gold Nanoparticles into Lipid Bilayers | |
Sec14-nodulin proteins and the patterning of phosphoinositide landmarks for developmental control of membrane morphogenesis | |
Seipin traps triacylglycerols to facilitate their nanoscale clustering in the endoplasmic reticulum membrane | |
Selective effect of cell membrane on synaptic neurotransmission | |
Significance of sterol structural specificity. Desmosterol cannot replace cholesterol in lipid rafts | |
Structural basis of actin monomer re-charging by cyclase-associated protein. | |
Structure and dynamics of a human myelin protein P2 portal region mutant indicate opening of the β barrel in fatty acid binding proteins. | |
Systematic coarse graining from structure using internal states: application to phospholipid/cholesterol bilayer | |
Tail-Oxidized Cholesterol Enhances Membrane Permeability for Small Solutes | |
Temperature-induced structural transition in-situ in porcine lens--changes observed in void size distribution | |
Transient Ordered Domains in Single-Component Phospholipid Bilayers | |
Under the influence of alcohol: the effect of ethanol and methanol on lipid bilayers | |
Understanding the Role of Lipids in Signaling Through Atomistic and Multiscale Simulations of Cell Membranes | |
What Can We Learn about Cholesterol's Transmembrane Distribution Based on Cholesterol-Induced Changes in Membrane Dipole Potential? |