Herschlag, Daniel
Herschlag, Daniel, 1958-
Daniel Herschlag American biochemist
VIAF ID: 103354076 (Personal)
Permalink: http://viaf.org/viaf/103354076
Preferred Forms
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100 0 _ ‡a Daniel Herschlag ‡c American biochemist
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100 1 _ ‡a Herschlag, Daniel
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100 1 _ ‡a Herschlag, Daniel
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100 1 _ ‡a Herschlag, Daniel ‡d 1958-
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4xx's: Alternate Name Forms (6)
Works
Title | Sources |
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Arginine Coordination in Enzymatic Phosphoryl Transfer: Evaluation of the Effect of Arg166 Mutations in Escherichia coli Alkaline Phosphatase † ‡ |
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Assessment of enzyme active site positioning and tests of catalytic mechanisms through X-ray-derived conformational ensembles |
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Biological phosphoryl-transfer reactions: understanding mechanism and catalysis |
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Biophysical, chemical and functional probes of RNA structure, interactions and folding. |
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Blind tests of RNA-protein binding affinity prediction |
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Coarse-grained modeling of large RNA molecules with knowledge-based potentials and structural filters |
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Comparative Enzymology in the Alkaline Phosphatase Superfamily to Determine the Catalytic Role of an Active-Site Metal Ion |
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Critical assessment of nucleic acid electrostatics via experimental and computational investigation of an unfolded state ensemble |
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Dissecting electrostatic screening, specific ion binding, and ligand binding in an energetic model for glycine riboswitch folding |
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Dissecting eukaryotic translation and its control by ribosome density mapping |
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Do conformational biases of simple helical junctions influence RNA folding stability and specificity? |
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Enhancement of RNA/Ligand Association Kinetics via an Electrostatic Anchor |
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Evaluating the Catalytic Contribution from the Oxyanion Hole in Ketosteroid Isomerase |
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Evaluation of ion binding to DNA duplexes using a size-modified Poisson-Boltzmann theory |
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Evolutionary Conservation and Diversification of Puf RNA Binding Proteins and Their mRNA Targets |
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Exploring the folding landscape of a structured RNA |
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Extensive association of functionally and cytotopically related mRNAs with Puf family RNA-binding proteins in yeast |
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Functional identification of catalytic metal ion binding sites within RNA. |
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Fundamental challenges in mechanistic enzymology: progress toward understanding the rate enhancements of enzymes |
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Gold nanocrystal labels provide a sequence-to-3D structure map in SAXS reconstructions. |
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Ground state destabilization by anionic nucleophiles contributes to the activity of phosphoryl transfer enzymes |
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High-resolution analysis of Zn(2+) coordination in the alkaline phosphatase superfamily by EXAFS and x-ray crystallography |
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How to measure and evaluate binding affinities |
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Hydrogen Bonds: Simple after All? |
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Increasing the length of poly-pyrimidine bulges broadens RNA conformational ensembles with minimal impact on stacking energetics |
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The individual and the team in collaborative science |
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Instrumentation and experimental procedures for robust collection of X-ray diffraction data from protein crystals across physiological temperatures |
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The ligand-free state of the TPP riboswitch: a partially folded RNA structure |
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Multiple native states reveal persistent ruggedness of an RNA folding landscape |
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National technology and industrial base integration : how to overcome barriers and capitalize on cooperation |
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Quantitative and comprehensive decomposition of the ion atmosphere around nucleic acids |
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A repulsive field: advances in the electrostatics of the ion atmosphere |
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Revealing enzyme functional architecture via high-throughput microfluidic enzyme kinetics |
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Riboswitch conformations revealed by small-angle X-ray scattering |
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Salt dependence of the radius of gyration and flexibility of single-stranded DNA in solution probed by small-angle x-ray scattering |
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Sequence-dependent RNA helix conformational preferences predictably impact tertiary structure formation |
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Single Molecule Analysis Research Tool (SMART): an integrated approach for analyzing single molecule data |
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Single-molecule dataset (SMD): a generalized storage format for raw and processed single-molecule data |
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Structural Coupling Throughout the Active Site Hydrogen Bond Networks of Ketosteroid Isomerase and Photoactive Yellow Protein |
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Structural transitions and thermodynamics of a glycine-dependent riboswitch from Vibrio cholerae |
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Systematic identification of mRNAs recruited to argonaute 2 by specific microRNAs and corresponding changes in transcript abundance |
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Tungstate as a Transition State Analog for Catalysis by Alkaline Phosphatase |
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Understanding nucleic acid-ion interactions |
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uPIC-M: Efficient and Scalable Preparation of Clonal Single Mutant Libraries for High-Throughput Protein Biochemistry |
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Use of anion-aromatic interactions to position the general base in the ketosteroid isomerase active site |
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Visualizing the formation of an RNA folding intermediate through a fast highly modular secondary structure switch |
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