Anion-selective Formate/nitrite transporters: taxonomic distribution, phylogenetic analysis and subfamily-specific conservation pattern in prokaryotes. |
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Antiapoptotic Bcl-2 homolog CED-9 in Caenorhabditis elegans: dynamics of BH3 and CED-4 binding regions and comparison with mammalian antiapoptotic Bcl-2 proteins |
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ATCUN-like metal-binding motifs in proteins: identification and characterization by crystal structure and sequence analysis |
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Behavior of solvent-exposed hydrophobic groove in the anti-apoptotic Bcl-XL protein: clues for its ability to bind diverse BH3 ligands from MD simulations |
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Caractérisation génomique, structurale et fonctionnelle des protéines liant les molécules odorantes dans le système olfactif des moustiques vecteurs de maladies infectieuses. |
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Characterization of proline-containing right-handed alpha-helix by molecular dynamics studies. |
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Comparison of metal-binding strength between methionine and cysteine residues: Implications for the design of metal-binding motifs in proteins. |
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Computational Design of BH3-Mimetic Peptide Inhibitors That Can Bind Specifically to Mcl-1 or Bcl-XL: Role of Non-Hot Spot Residues |
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Conformational studies on peptides with proline in the right-handed alpha-helical region |
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Controlling in Vitro Insulin Amyloidosis with Stable Peptide Conjugates: A Combined Experimental and Computational Study |
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Cooperativity in Plant Plasma Membrane Intrinsic Proteins (PIPs): Mechanism of Increased Water Transport in Maize PIP1 Channels in Hetero-tetramers |
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Dynamics of noncovalent interactions in all-α and all-β class proteins: implications for the stability of amyloid aggregates |
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End-to-end and end-to-middle interhelical interactions: new classes of interacting helix pairs in protein structures. |
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Enforcing solution phase nanoscopic aggregation in a palindromic tripeptide |
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Force field dependence of phospholipid headgroup and acyl chain properties: comparative molecular dynamics simulations of DMPC bilayers. |
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Genomic, structural and functional characterization of odorant binding proteins in olfaction of mosquitoes involved in infectious disease transmission |
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Hidden coding potential of eukaryotic genomes: nonAUG started ORFs |
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Identification of core structural residues in the sequentially diverse and structurally homologous Bcl-2 family of proteins |
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Intra-helical salt-bridge and helix destabilizing residues within the same helical turn: Role of functionally important loop E half-helix in channel regulation of major intrinsic proteins |
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Major intrinsic protein superfamily: channels with unique structural features and diverse selectivity filters |
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MIPModDB: a central resource for the superfamily of major intrinsic proteins |
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Modelling membrane proteins using structural restraints |
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Molecular dynamics simulations of C-terminal decapeptide of gastrin-releasing peptide in DMPC bilayers: structure, stability and orientation of the peptide hormone within the bilayers |
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New subfamilies of major intrinsic proteins in fungi suggest novel transport properties in fungal channels: implications for the host-fungal interactions |
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Oxygen-aromatic contacts in intra-strand base pairs: analysis of high-resolution DNA crystal structures and quantum chemical calculations |
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Packing interactions of aib-containing helices: Molecular modeling of parallel dimers of simple hydrophobic helices and of alamethicin |
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The pore domain of the nicotinic acetylcholine receptor: molecular modeling, pore dimensions, and electrostatics. |
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Prediction of translation initiation sites in human mRNA sequences with AUG start codon in weak Kozak context: A neural network approach |
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Presence of Intra-helical Salt-Bridge in Loop E Half-Helix Can Influence the Transport Properties of AQP1 and GlpF Channels: Molecular Dynamics Simulations of In Silico Mutants |
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Relationship between helix stability and binding affinities: molecular dynamics simulations of Bfl-1/A1-binding pro-apoptotic BH3 peptide helices in explicit solvent. |
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Self-contacts in Asx and Glx residues of high-resolution protein structures: role of local environment and tertiary interactions |
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Seven-helix bundles: molecular modeling via restrained molecular dynamics. |
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Solvation, water permeation, and ionic selectivity of a putative model for the pore region of the voltage-gated sodium channel. |
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Structural features of isolated M2 helices of nicotinic receptors. Simulated annealing via molecular dynamics studies |
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Unconventional N-H…N Hydrogen Bonds Involving Proline Backbone Nitrogen in Protein Structures |
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Water dynamics in model transbilayer pores. |
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Water in channel-like cavities: structure and dynamics. |
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