Gordon K Smyth researcher
Smyth, Gordon K.
aSmyth, Gordon K.
VIAF ID: 307276110 (Personal)
Permalink: http://viaf.org/viaf/307276110
Preferred Forms
- 100 0 _ ‡a Gordon K Smyth ‡c researcher
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- 100 1 _ ‡a Smyth, Gordon K.
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- 100 1 _ ‡a Smyth, Gordon K.
- 100 1 _ ‡a aSmyth, Gordon K.
4xx's: Alternate Name Forms (8)
Works
Title | Sources |
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Employing symmetry constraints for improved frequency estimation by eigenanalysis methods | |
Fitting Tweedie's compound poisson model to insurance claims data | |
Generalized linear models with examples in R | |
An improved saddlepoint approximation based on the negative binomial distribution for the general birth process | |
Integrative analysis of RUNX1 downstream pathways and target genes | |
Interferon-gamma released from omental adipose tissue of insulin-resistant humans alters adipocyte phenotype and impairs response to insulin and adiponectin release. | |
Leishmaniasis host response loci (lmr1–3) modify disease severity through a Th1/Th2-independent pathway | |
limma powers differential expression analyses for RNA-sequencing and microarray studies | |
limmaGUI: a graphical user interface for linear modeling of microarray data | |
Linear ubiquitin chain assembly complex coordinates late thymic T-cell differentiation and regulatory T-cell homeostasis | |
Lung Basal Stem Cells Rapidly Repair DNA Damage Using the Error-Prone Nonhomologous End-Joining Pathway | |
Maximal killing of lymphoma cells by DNA damage-inducing therapy requires not only the p53 targets Puma and Noxa, but also Bim | |
Moderated statistical tests for assessing differences in tag abundance | |
Molecular dissection of the pea shoot apical meristem | |
Molecular profiling reveals features of clinical immunity and immunosuppression in asymptomatic P. falciparum malaria | |
The molecular signature of CD8+ T cells undergoing deletional tolerance | |
The molecular signature of tissue resident memory CD8 T cells isolated from the brain | |
MOZ and BMI1 play opposing roles during Hox gene activation in ES cells and in body segment identity specification in vivo | |
MOZ directs the distal-less homeobox gene expression program during craniofacial development | |
MOZ regulates B-cell progenitors and, consequently, Moz haploinsufficiency dramatically retards MYC-induced lymphoma development | |
Murine hematopoietic blast colony-forming cells and their progeny have distinctive membrane marker profiles | |
Murine Oncostatin M Acts via Leukemia Inhibitory Factor Receptor to Phosphorylate Signal Transducer and Activator of Transcription 3 (STAT3) but Not STAT1, an Effect That Protects Bone Mass | |
Mutant TRP53 exerts a target gene-selective dominant-negative effect to drive tumor development | |
Myocardial Gene Expression Associated with Genetic Cardiac Hypertrophy in the Absence of Hypertension | |
Neither loss of Bik alone, nor combined loss of Bik and Noxa, accelerate murine lymphoma development or render lymphoma cells resistant to DNA damaging drugs | |
The neuropeptide VIP confers anticipatory mucosal immunity by regulating ILC3 activity | |
No counts, no variance: allowing for loss of degrees of freedom when assessing biological variability from RNA-seq data. | |
Nonequivalent gene expression and copy number alterations in high-grade serous ovarian cancers with BRCA1 and BRCA2 mutations | |
Normalization of cDNA microarray data | |
De novo detection of differentially bound regions for ChIP-seq data using peaks and windows: controlling error rates correctly | |
Optimizing the noise versus bias trade-off for Illumina whole genome expression BeadChips | |
Orchestrating high-throughput genomic analysis with Bioconductor | |
Partitioned algorithms for maximum likelihood and other non-linear estimation | |
Pax5 loss imposes a reversible differentiation block in B-progenitor acute lymphoblastic leukemia | |
Peripheral natural killer cell maturation depends on the transcription factor Aiolos | |
Permutation P-values should never be zero: calculating exact P-values when permutations are randomly drawn. | |
Platelets kill intraerythrocytic malarial parasites and mediate survival to infection | |
Polycomb repressive complex 2 (PRC2) restricts hematopoietic stem cell activity | |
Pre-mitotic genome re-organisation bookends the B cell differentiation process | |
Pro-inflammatory CD11c+CD206+ adipose tissue macrophages are associated with insulin resistance in human obesity | |
Proteomic and metabolomic analyses of mitochondrial complex I-deficient mouse model generated by spontaneous B2 short interspersed nuclear element (SINE) insertion into NADH dehydrogenase (ubiquinone) Fe-S protein 4 (Ndufs4) gene | |
Proximal genomic localization of STAT1 binding and regulated transcriptional activity | |
Publisher Correction: Barcoding reveals complex clonal behavior in patient-derived xenografts of metastatic triple negative breast cancer | |
Puma and to a lesser extent Noxa are suppressors of Myc-induced lymphomagenesis | |
qtQDA: quantile transformed quadratic discriminant analysis for high-dimensional RNA-seq data | |
Quantitative proteomic profiling reveals novel region-specific markers in the adult mouse brain | |
R code and downstream analysis objects for the scRNA-seq atlas of normal and tumorigenic human breast tissue | |
The R package Rsubread is easier, faster, cheaper and better for alignment and quantification of RNA sequencing reads | |
RANK ligand as a potential target for breast cancer prevention in BRCA1-mutation carriers. | |
Regulation of hematopoietic stem cells by their mature progeny | |
RNA-seq analysis is easy as 1-2-3 with limma, Glimma and edgeR | |
RNA-seq mixology: designing realistic control experiments to compare protocols and analysis methods | |
ROAST: rotation gene set tests for complex microarray experiments | |
Robust frequency estimation using elemental sets | |
ROBUST HYPERPARAMETER ESTIMATION PROTECTS AGAINST HYPERVARIABLE GENES AND IMPROVES POWER TO DETECT DIFFERENTIAL EXPRESSION. | |
SAGE analysis of genes differentially expressed in presymptomatic TgSOD1G93A transgenic mice identified cellular processes involved in early stage of ALS pathology | |
The Selective Expansion and Targeted Accumulation of Bone Marrow-Derived Macrophages Drive Cardiac Vasculitis | |
Semi-parametric extended Poisson process models | |
Sensitization of BCL-2-expressing breast tumors to chemotherapy by the BH3 mimetic ABT-737 | |
Signal regulatory protein molecules are differentially expressed by CD8- dendritic cells | |
Small-sample estimation of negative binomial dispersion, with applications to SAGE data | |
Spatiotemporal regulation of multiple overlapping sense and novel natural antisense transcripts at the Nrgn and Camk2n1 gene loci during mouse cerebral corticogenesis. | |
Statistical analysis of an RNA titration series evaluates microarray precision and sensitivity on a whole-array basis | |
Statistical modeling of sequencing errors in SAGE libraries | |
The Subread aligner: fast, accurate and scalable read mapping by seed-and-vote | |
Susceptibility to acute rheumatic fever based on differential expression of genes involved in cytotoxicity, chemotaxis, and apoptosis | |
Synergistic action of the MCL-1 inhibitor S63845 with current therapies in preclinical models of triple-negative and HER2-amplified breast cancer. | |
A systematic approach for comprehensive T-cell epitope discovery using peptide libraries | |
Targeting antigen to mouse dendritic cells via Clec9A induces potent CD4 T cell responses biased toward a follicular helper phenotype. | |
Targeting triple-negative breast cancers with the Smac-mimetic birinapant | |
Technical variability is greater than biological variability in a microarray experiment but both are outweighed by changes induced by stimulation | |
Testing significance relative to a fold-change threshold is a TREAT. | |
Tissue-resident ductal macrophages survey the mammary epithelium and facilitate tissue remodelling | |
The TNF Receptor Superfamily-NF-κB Axis Is Critical to Maintain Effector Regulatory T Cells in Lymphoid and Non-lymphoid Tissues | |
TRAF2 regulates TNF and NF-κB signalling to suppress apoptosis and skin inflammation independently of Sphingosine kinase 1 | |
The transcription factor IRF4 is essential for TCR affinity-mediated metabolic programming and clonal expansion of T cells | |
Transcription factor IRF4 regulates germinal center cell formation through a B cell-intrinsic mechanism | |
Transcription-factor-mediated supervision of global genome architecture maintains B cell identity | |
The transcription factors Blimp-1 and IRF4 jointly control the differentiation and function of effector regulatory T cells | |
Transcriptional profiling of the postnatal brain of the Ts1Cje mouse model of Down syndrome | |
Transcriptome analyses of mouse and human mammary cell subpopulations reveal multiple conserved genes and pathways | |
Transposon mutagenesis reveals cooperation of ETS family transcription factors with signaling pathways in erythro-megakaryocytic leukemia | |
An update on using CRISPR/Cas9 in the one-cell stage mouse embryo for generating complex mutant alleles. | |
Use of within-array replicate spots for assessing differential expression in microarray experiments. | |
Using DNA microarrays to study gene expression in closely related species. | |
voom: Precision weights unlock linear model analysis tools for RNA-seq read counts |